BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013G10SP1|AL426589
(790 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1763 1477 0.0
>3x_Contig1763
Length = 22654
Score = 1477 bits (742), Expect = 0.0
Identities = 775/785 (98%), Gaps = 3/785 (0%)
Strand = Plus / Plus
Query: 6 ttgggagaaaaattgtcttggaaaattagctccgaaatcggctgacttaagctcattgat 65
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 ttgggagaaaaatggtcttggaaaattagctccgaaatcggctgacttaagctcattgat 1381
Query: 66 ggatcccgtgaagatagcagaacaatccattgatctcaatctcaagctaatgaaatggag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 ggatcccgtgaagatagcagaacaatccattgatctcaatctcaagctaatgaaatggag 1441
Query: 126 gattgctcctgacattgatctagaaagaataaagaacattaaagcattgatcttggggtc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 gattgctcctgacattgatctagaaagaataaagaacattaaagcattgatcttggggtc 1501
Query: 186 aggtaccctaggttgctacgtggctagagctttattagcttggggtactcgtcatgtaac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1502 aggtaccctaggttgctacgtggctagagctttattagcttggggtactcgtcatgtaac 1561
Query: 246 ttttgtcgacaacagcactgtctctttctctaatccggtaaggcaaccattattcaactt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1562 ttttgtcgacaacagcactgtctctttctctaatccggtaaggcaaccattattcaactt 1621
Query: 306 tgaagattgtgggcgaccaaaggccgaagctgccagtgactctctgaagaagatatttcc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1622 tgaagattgtgggcgaccaaaggccgaagctgccagtgactctctgaagaagatatttcc 1681
Query: 366 ttctgtcgtttctgcaggttatcaattggaaataccaatgataggacatcctgtatcgaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 ttctgtcgtttctgcaggttatcaattggaaataccaatgataggacatcctgtatcgaa 1741
Query: 426 cgaaagcaagcagaggaaggattatgaaattttggacgagcttataaggacgcatgatgt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 cgaaagcaagcagaggaaggattatgaaattttggacgagcttataaggacgcatgatgt 1801
Query: 486 tatatttcttttaatggatgcacgcgagacgagatggcttccctcggtgcttggacgaat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 tatatttcttttaatggatgcacgcgagacgagatggcttccctcggtgcttggacgaat 1861
Query: 546 gcatgaaaaaatagttattaatgcggcccttggttttgacagttatttggtaantgagan 605
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1862 gcatgaaaaaatagttattaatgcggcccttggttttgacagttatttggtaa-tgaga- 1919
Query: 606 mntggcawcwataatgactacctgtggttgctatttctgtaacgatatcgtggccccaag 665
||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1920 catggcaacaataatgacaacctg-ggttgctatttctgtaacgatatcgtggccccaag 1978
Query: 666 tgattctctaactgacagawcattagatcagatgtgtactgtaactagaccgggtgttgc 725
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1979 tgattctctaactgacagaacattagatcagatgtgtactgtaactagaccgggtgttgc 2038
Query: 726 cctattagcggcttcccaggctgttgaattattggtgacatatcttcagccttcgacgaa 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2039 cctattagcggcttcccaggctgttgaattattggtgacatatcttcagccttcgacgaa 2098
Query: 786 cgtgc 790
|||||
Sbjct: 2099 cgtgc 2103
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5197
Number of Sequences: 1807
Number of extensions: 5197
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 790
length of database: 10,358,551
effective HSP length: 16
effective length of query: 774
effective length of database: 10,329,639
effective search space: 7995140586
effective search space used: 7995140586
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)